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| Code Block | ||
|---|---|---|
| ||
export PATH="/mnt/bioi/tools/cellranger/8.0.0/bin":$PATH export PATH="/mnt/bioi/tools/UCSC_utils/2023_08:$PATH" |
Web-based
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RStudio and
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JupyterHub
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applications
The following web application software is available on all PODs. Accessing a POD node with your web browser will take you to an application login page where your BRCF account credentials can be used to access the application's web interface. Your default directory will be your Home directory. See Home directory quotas for important storage-quota related information. See also About R and R Studio Server and About Python and JupyterHub server help pages.
| Software | Description | Access | Software | Help |
|---|---|---|---|---|
| JupyterHub Server | Python Notebook Server | Available on all compute servers https://<server_name>.ccbb.utexas.edu |
for example: |
| Python 3.9 | About R and R Studio Server | |
| RStudio Server |
| RStudio Web Interface |
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| R 4.3.1 |
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Standard OS Software
(to find in repo: frep -r pattern .| grep -v /spec/)
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