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Info

We will meet  at FNT 1.104 from Tuesday May 27 to Friday May 30 at 1:30-4:30pm for our class.

You are strongly encouraged to attend in person, but In person attendance is recommended, because the course is more difficult to follow remotely. However, if you would like to attend virtually, use this zoom link: 

https://utexas.zoom.us/j/96012546979?pwd=Xx4Je9KHZVKSFJFhAQwuwWGihL1kyS.1

Zoom Instructions:

Please make sure your zoom version is updated ( and that you have a zoom account )

-- this is  required to join a UT-sponsored Zoom session. See this link for more details about zoom requirements:  https://zoom.its.utexas.edu/home

Other setup:

Please make sure you have an ssh client installed on your computer. All macs come with terminal, so no installation is required. For windows laptops, install putty and winSCP.

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This is a course designed to give you an introduction to data manipulation and analysis in a hands-on manner. It will comprise consist of lectures and guided tutorials.

This The course has the following objectives: 

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Name

Affiliation

Expertise

How to contact?

Matt Bramble

CBRS, bioinformatics group

Unix, R, Python, epigenetics.

matthew.bramble@austin.utexas.edu or come to FNT1.206D

Day 1

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: Introduction to Unix

1. Login to the POD

Info

Login to the POD

If you are using a terminal, open the terminal, and type:

ssh username@gsafcbig01.ccbb.utexas.edu
(replace username with your student username – studentNN)

If you are using putty, open it and enter the following:

hostname: gsafcbig01.ccbb.utexas.edu

Upon prompting, enter your username and the password

NEXT:

Open the following link in a new window or tab. Be sure to bookmark this introduction page. We will be returning.

Go to Unix/Linux wiki

If your Terminal has a dark background, the default shell colors can be hard to read. Execute this line to display directory names in yellow.

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For now, just copy the appropriate line above, paste it into your Terminal window (after logging on), then press Enter.

2. Go to the Unix component of the course

Open the following link in a new window or tab. Be sure to bookmark this introduction page. We will be returning.

Go to Unix/Linux wiki