...
Next, see if HISAT2 is a module that is available on stampedelonestar5.
| Code Block |
|---|
module spider hisat |
As you can see, HISAT2 is not currently a module on stampedelonestar5. When a program is not available on stampedelonestar5, you can install it locally in your home or work directory. I have already installed HISAT in my work directory and since my work directory is in your path, you should be able to run hisat2. Type in hisat2 to see if it is in your path and to get usage information.
...