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  5. SSC Intro to NGS Bioinformatics Course

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Anna Battenhouse

Anna Battenhouse

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  • Introduction to genome variation
  • (JB)
  • Variant calling tutorial (SAMtools) (JB)
  • Integrative Genomics Viewer (IGV) tutorial (Part 2) (JB)
  • (JB)
  • Calling variants in diploid genomes (SPHS)
  • Variant calling with GATK (SPHS)
  • Visualize mapped data at UCSC genome browser (AB)
  • Annotating variants (SPHS)

...

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