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changes.mady.by.user Jeffrey E Barrick

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changes.mady.by.user Geoffrey R Colburn

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File Name

Description

Sample

61FTVAAXX_2_1.fastq

Paired-end Illumina, First of mate-pair, FASTQ format

Re-sequenced E. coli genome

61FTVAAXX_2_2.fastq

Paired-end Illumina, Second of mate-pair, FASTQ format

Re-sequenced E. coli genome

NC_012967.1.fasta

Reference Genome in FASTA format

E. coli B strain REL606

Map data using

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BWA

You should submit the bwa aln and bwa sampe commands as jobs to the queue, one after the other.

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