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  • Jump to the next point of interest. Click on a track name on the left side of the window (Ex: bowtie.vcf), to select it. You can then use control-f and control-b to jump forward and backward within that list of features. Try this on the variant calls track.
  • Jump right to a gene. Type its name into the search box. Try "topA".
  • Navigate more quickly. The home and end keys jump a page backward and forward page-up page-down, home, end.
  • Load multiple VCF and BAM alignments at once. Try this to compare a few different regions between the bowtie and BWA results.
  • Change the appearance of genes. Right click on the gene track and try "expanded". Experiment with the other options.
  • Change the appearance of reads. Right click on a BAM track and choose "show all bases" and "expanded". Experiment with the other options.

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