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- Check out the rbsA gene region? What's going on here?
- What is going on in the pykF gene region? You might see red read pairs. What does that mean?
- Go to coordinate 2,698,092. Compare the bowtie and BWA alignments. Can you explain what's going on here?
- Go to coordinate 475,263. Compare the bowtie and BWA alignments. What's the story here?
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Advanced exercise: human data scavenger hunt
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Data from the CEU trio from the 1000 Genomes Project can be found directly from the Broad's server for IGV.
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