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cds cd my_rnaseq_course cp -r /corral-repl/utexas/BioITeam/rnaseq_course/tophat_exercise . & cp -r /corral-repl/utexas/BioITeam/rnaseq_course/tophat_results . & #pregenerated tophat results cd tophat_exercise #Lets get pregenerated bwa results as well for doing comparisons cp -r /corral-repl/utexas/BioITeam/rnaseq_course/bwa_mem_results . & cd tophat_exercise |
Due to the size of the data and length of run time, many of the programs have already been run for this exercise. We will submit some jobs, but because we cannot wait for it to complete, we will be looking through already generated results. You will then be parsing the output, finding answers, and visualizing results (in the directory tophat_results).
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