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  1. Content
  2. Bioinformatics Team Home
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  5. SSC Intro to NGS Bioinformatics Course

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Version Old Version 235 New Version 236
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Anna Battenhouse

Jeffrey E Barrick

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May 16, 2013

May 17, 2013

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  • Introduction to Mapping and Tutorial** (JB)
  • Mapping tutorial (bowtie2, BWA) (JB/GC)
  • Integrative Genomics Viewer (IGV) tutorial (JB)
  • Tutorial - Start diploid mapping for Day 2

...

  • Evaluating your raw sequencing data (JB/AB)
    • GSAF adaptor and barcode sequence resource
    Integrative Genomics Viewer (IGV) tutorial (JB)
  • Mapped read data evaluation (SAMtools) (SPHS, DP)
  • Practical advice - Final odss & ends for short read re-sequencing data

...

General
Content
Integrations
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