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Warning
titleWarning: To submit to queue
Code Block
nano commands.bedtools
 
bedtools multicov -bams C1_R1_thout/accepted_hits.bam C1_R2_thout/accepted_hits.bam C1_R3_thout/accepted_hits.bam C2_R1_thout/accepted_hits.bam C2_R2_thout/accepted_hits.bam C2_R3_thout/accepted_hits.bam -bed reference/genes.formatted.gtf > gene_counts.gff &
Code Block
launcher_creator.py -j commands.bedtools -n multicov -q normal -t 02:00:00 -a CCBB -l bedtools_launcher.sge
qsub bedtools_launcher.sge

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