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Code Block
titleGet set up
 
cds
cd my_rnaseq_course

#If you've already copied day_3 stuff over, ignore next line
cp -r /corral-repl/utexas/BioITeam/rnaseq_course_2015/cd day_3/cufflinks_results .
 
cd day_3_partB/cufflinks_results

Step 1: Tophat

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