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- Differential gene expression analysis
- Splice variant analysis
<break> - non-coding RNA analysis unique mapping (shrimp/grep), miRNA’s abundance/editing, other: snoRNA, snRNA, lincRNA, piRNA, tRNA, degradome, etc. etc. (not poly-A; not annotated)
- Transcriptome assembly & annotation velvet/oases, TrinityRNAseq; BLAST, GOminer, (ELI?)
Day 4: Assembly
Resources
- [[Tool List | Tools]]
- File Formats
Misc
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This is code |
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