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mkdir IGV cp NC_012967.1.gbk.gff IGV cp samtools_bowtie/NC_012967.1.fasta IGV cp samtools_bowtie/NC_012967.1.fasta.fai IGV cp samtools_bowtie/SRR030257.sorted.bam IGV/bowtie.sorted.bam cp samtools_bowtie/SRR030257.sorted.bam.bai IGV/bowtie.sorted.bam.bai cp samtools_bwa/SRR030257.sorted.bam IGV/bwa.sorted.bam cp samtools_bwa/SRR030257.sorted.bam.bai IGV/bwa.sorted.bam.bai cp comparison/* IGV |
Now, copy this entire IGV directory back to your local Desktop machine.
Launching IGV
Navigate a web browser to this page: http://www.broadinstitute.org/software/igv/download
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