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- General introduction (SPHS)
- Getting started at TACC
- Introduction to mapping
- Evaluating your raw sequencing data
- Alignment with bowtie, BWA (JB/GC)
- Download Presentation on Mappers, etc. NGS + class 22Mar12.ppt
- Using the Integrative Genomics Viewer (IGV) (JB)
- Workflow diagram of variant calling
- start diploid mapping
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