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cd $BI/rnaseq_course/cufflinks_exercise/resultresults/C1_R1_clout ls -l drwxrwxr-x 2 nsabell-rw------- 1 daras G-801021801020 627673 32768 May 2217 1516:10 cuffcmp -rwxr-xr-x58 genes.fpkm_tracking -rw------- 1 daras G-803889801020 1021025 14MMay Aug17 16 12:4958 transcriptsisoforms.gtf -rwxr-xr-xfpkm_tracking -rw------- 1 daras G-803889801020 597K Aug 16 12:49 genes.fpkm_tracking -rwxr-xr-x 1 daras G-8038890 960KMay Aug17 16 12:4950 isoformsskipped.fpkm_trackinggtf -rwxr-xr-xrw------- 1 daras G-803889801020 14784740 May 0 Aug17 16 12:3358 skippedtranscripts.gtf |
Step 3: Merging assemblies using cuffmerge
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