Content Comparison

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• General introduction (SPHS)
  • Introduction to Bioinformatics Prezi
• Getting started at TACC
• Linux refresher (SPHS)
  • 
• Using TACC's Lonestar Cluster
  • Diagram of Lonestar's directories
  • 
  • Diagram of running a job on Lonestar
  • 
• Introduction to next-gen sequencing technologies
  • Official Illumina video | Another Illumina video
  • Broad Center GA Boot Camp
  • GSAF adaptor and barcode sequence resource
• Application: Example genome variant calling pipeline
  • 
• Evaluating your raw sequencing data (JB)
• Introduction to Mapping and Tutorial
  • * Image Removed !ppt_icon.gif! Introduction to mapping presentation\
    (JB)
  • Mapping tutorial (bowtie2, BWA) (JB/GC)
• Integrative Genomics Viewer (IGV) tutorial (JB)
• start diploid mapping (copy from Day 2 content)

Enrichment modules (4:30-5:30)

• Installing Linux virtual machine on Windows (DP)
• Sharing Linux tricks (SPHS)

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