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Dhivya Arasappan

Dhivya Arasappan

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The wc -l command says there are 15200720 lines. FASTQ files have 4 lines per sequence, so the file has 15,200,720/4 or 3,800,180 sequences.

Code Block
grep '^@SRR' data/SRR030257_1.fastq|wc -l

 

Lets move on to assessing the quality of this data...