...
Go ahead and click on the "Launch with 2 GB" option. This will download a "Java Web Start" file that you can launch by locating it on your Desktop and double-clicking.
Locally on the Classroom Machines booted in Linux
| Code Block |
|---|
wget http://www.broadinstitute.org/igv/projects/downloads/IGV_2.1.22.zip
unzip IGV_2.1.22.zip
cd IGV_2.1.22
java -Xmx2g -jar igv.jar
|
On your own computer
| Code Block |
|---|
Use this link to download IGV
http://www.broadinstitute.org/igv/projects/downloads/IGV_2.1.22.zip
|
After unzipping, you should be able to click on igv.bat for Windows or igv.command on MacOSX to lauch IGV. If this is not working, you might need to try the web start.
Load genome into IGV
From the main window of IGV, click on File -> Import Genome and you should be presented with the following window.
...