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Code Block
titleGet set up
cds
cd my_rnaseq_course
cp -r /corral-repl/utexas/BioITeam/rnaseq_course_2015/diff_results .
cd diff_results
 
 

#We need the cuffdiff results because that is the input to cummeRbund.

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Code Block
#module load R will not work for this R package because its needs the latest version of R. So, we'll load a local version.
$BI

/work/01184/daras/bin/R

 
What is $BI here?

 

B) Within R environment, install package cummeRbund

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