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Enrichment test: whether “DEG list” contain contains more representatives of a certain GO category than expected by chance (Fisher’s exact, hypergeometric, or similar test).
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SCP THE DATA OVER TO YOUR COMPUTER:
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#ON stampede2ls6: copy the path for the ALL and DEG files pwd #ON LOCAL COMPUTER: from a terminal tab scp <username>@stampede2<username>@ls6.tacc.utexas.edu:<pathtofileson/DEG> . scp <username>@stampede2<username>@ls6.tacc.utexas.edu:<pathtofileson/ALL> . |
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SCP THE DATA OVER TO YOUR COMPUTER:
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#ON stampede2ls6: copy the path for the ALLRANKED file pwd #ON LOCAL COMPUTER: from a terminal tab scp <username>@stampede2<username>@ls6.tacc.utexas.edu:<pathtofileson/ALLRANKED> . |
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