...
Some additional 5 bp barcodes can be found here:http://comailab.genomecenter.ucdavis.edu/index.php/Barcodes
An additional set of After exhaustive searching of all 4096 6-mers, the following table is all remaining 6 bp barcodes that have hamming distance of at least 3 from the table above of 49 barcodes is as follows (NOTE: these have NOT been tested on the sequencer as of 2/7/12):
Sequence | GSAF name |
|
|---|---|---|
AAACAC | UTBC50 |
|
TGAAGG | UTBC51 |
|
AACATA | UTBC52 |
|
CGCGTC | UTBC53 |
|
GATACA | UTBC54 |
|
GGTGTG | UTBC55 |
|
TAAGAA | UTBC56 |
|
AGCGAG | UTBC57 |
|
CGGTTA | UTBC58 |
|
AGCTTT | UTBC59 |
|
TGGTCT | UTBC60 |
|
TATCCC | UTBC61 |
|
TGTCGT | UTBC62 |
|
CCCCAC | UTBC63 |
|
ATACGA | UTBC64 |
|
CCCTTG | UTBC65 |
|
ACCGGC | UTBC66 |
|
TTACTG | UTBC67 |
|
GGAACT | UTBC68 |
|
GTTATT | UTBC69 |
|
AAAAGT | UTBC70 |
|
AAGGGA | UTBC71 |
|
AAGTAT | UTBC72 |
|
ACATCT | UTBC73 |
|
ACGATT | UTBC74 |
|
ACGCCG | UTBC75 |
|
ACTCTC | UTBC76 |
|
AGAATC | UTBC77 |
|
ATTGGG | UTBC78 |
|
CCGCGT | UTBC79 |
|
CGCCCT | UTBC80 |
|
CTGCAG | UTBC81 |
|
GAAGTT | UTBC82 |
|
GCACCC | UTBC83 |
|
GCAGGA | UTBC84 |
|
GCCGCG | UTBC85 |
|
GGCGGT | UTBC86 |
|
GTATTA | UTBC87 |
|
TACGTG | UTBC88 |
|
TCACAT | UTBC89 |
|
TCTATA | UTBC90 |
|
TGCAAA | UTBC91 |
|
TGGCAC | UTBC92 |
|
TGTTAG | UTBC93 |
|
TTCTAT | UTBC94 |
|
...