| Title: | About Us | |
|---|---|---|
| Owner: | Scott Patrick Hunicke-Smith | |
| Creator: | Scott Patrick Hunicke-Smith | Aug 23, 2011 |
| Last Changed by: | Jessica Podnar | Oct 19, 2023 |
| Tiny Link: (useful for email) | https://cloud.wikis.utexas.edu/wiki/x/iRFPAg | |
| Export As: | Word · PDF | |
Incoming Links
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Genomic Sequencing and Analysis Facility User Support Wiki (1)
Contact us |
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Only Dhivya Arasappan can edit this page.
(set by Scott Patrick Hunicke-Smith at Aug 23, 2011 12:06)
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Only Vishy Iyer can edit this page.
(set by Vishy Iyer at Sep 30, 2015 14:53)
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(set by Vishy Iyer at Apr 26, 2016 15:08)
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Only Jessica Podnar can edit this page.
(set by Scott Patrick Hunicke-Smith at Aug 23, 2011 12:06)
| Time | Editor | |
|---|---|---|
| Oct 19, 2023 15:09 | Jessica Podnar | View Changes |
| Aug 25, 2023 17:21 | Jessica Podnar | View Changes |
| Illumina MiSeq sequencers (three) Illumina NextSeq 500 sequencer (two) Covaris S220 and E220 Adaptive Focused Acoustic shearing devices Agilent BioAnalyzer 2100 Agilent TapeStation Invitrogen Qubit fluorimeter and Thermoscientific Fluoroskan Tecan Evo and Hamilton Nimbus 10x Chromium system Ion Torrent S5 Lab protocols we are experienced with: Creation of fragment DNA sequencing libraries for all Illumina next-gen sequencers Creation of mate-pair sequencing libraries between 1.5kb and 4kb for Illumina next-gen sequencers Creation of RNA-seq libraries from total RNA, small RNA, and immuno-precipitated RNA for Illumina next-gen sequencers Creation of amplicon libraries (particularly 16s and ITS regions) for the Illumina next-gen sequencers Human exome and custom capture with the Agilent SureSelect, Illumina TruSeq, and Nimblegen SeqCap EZ kits Sample and library QC using the Agilent BioAnalyzer, Picogreen and Ribogreen fluorimetry, qPCR, and spectrophotometry Computational and software resources: The bioinformatcis group maintains a wide range of tools for NGS analysis and assembly and can assist with all of your analysis needs, please visit them here. Need your own server or access to one of ours, here is an explanation of the Biomedical Research Computing services with instructions for getting an account. In addition, the GSAF uses and works with the TACC bioinformatics group, supporting tools and applications suitable to the TACC environment. Want to get started? Contact us New to Unix? Check out some Unix and Perl resources for beginners. Our Mission and Vision Vision: The GSAF’s vision is to be a world-class genomic analysis center in terms of data quality, breadth of available methods, and productivity. Mission: The mission of the Genome Sequencing and Analysis Facility is to provide the best quality analytical results with the best value to life science researchers. Changed the Mission and Vision | ||
| Aug 25, 2023 17:12 | Jessica Podnar | View Changes |
| Aug 25, 2023 17:11 | Jessica Podnar | View Changes |
| Jul 10, 2023 13:50 | Jessica Podnar | |
Outgoing Links
|
Genomic Sequencing and Analysis Facility User Support Wiki (1)
About Us
|
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Bioinformatics Team (BioITeam) at the University of Texas (2)
Software
Getting started with Unix and Perl |
