Simulations and Tree Manipulation - April Wright

Please join us this Friday in MBB 1.210 at 1:15 to learn about simulation studies.

I will be using two Python libraries during Fridays' talk:

http://pythonhosted.org/DendroPy/

http://biopython.org/wiki/Download

Download them if you would like to follow along.

For the tree manipulation discussion, we will use this file of trees. It is (pared-down) output from a Mr. Bayes analysis:

bay.nex.run1.t

biopython.nex

Cheat Sheets:

DendropyCheatSheet

BioPhyloCheatSheet

Lecture slides:

Wright.pdf