Atlassian uses cookies to improve your browsing experience, perform analytics and research, and conduct advertising. Accept all cookies to indicate that you agree to our use of cookies on your device.

Atlassian cookies and tracking notice, (opens new window)

Atlassian uses cookies to improve your browsing experience, perform analytics and research, and conduct advertising. Accept all cookies to indicate that you agree to our use of cookies on your device. Atlassian cookies and tracking notice, (opens new window)

University Wiki Service

Core NGS Tools

Results will update as you type.

Day 1: Intro to NGS, Linux and TACC
Day 2: TACC batch system and FASTQ files
Day 3: Working with raw sequences
Day 4: Alignment and BAM file manipulation
Day 5: Post-Alignment Analysis
- Filtering with SAMTools
- Analysis using BEDTools
Resources
Catch up
Archive

Calendars

You‘re viewing this with anonymous access, so some content might be blocked.

/

Day 5: Post-Alignment Analysis

Updated Jun 01, 2021

Day 5: Post-Alignment Analysis

Jun 01, 2021

Filtering with SAMTools
Analysis using BEDTools

Confluence Documentation | Web Privacy Policy | Web Accessibility

{"serverDuration": 16, "requestCorrelationId": "d62bdd21e0db4ad5beaea9d11eaf5e95"}