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Day 1: Intro to NGS, Linux and TACC
Day 2: TACC batch system and FASTQ files
Day 3: Working with raw sequences
- Pre-processing raw sequences
Day 4: Alignment and BAM file manipulation
Day 5: Post-Alignment Analysis
Resources
Catch up
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Day 3: Working with raw sequences

Updated Jun 01, 2023

Day 3: Working with raw sequences

Jun 01, 2023

lecture: Sequence QC & preparation
Sequence quality control
Trimming

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