M.cavernosa example pipeline

Example of data processing and analyses


Instructions


Instructions in the following text files:

  1. mcav_nov2018_reads2bams.txt
  2. mcav_nov2018_qual_pca_admix.txt
  3. mcav_nov2018_Fst_LD.txt
  4. mcav_nov2018_AFS.txt





Reference genome files:

Mcav_genome_03012018.tgz

Mcavernosa_gene_annotation.tar.gz