PyReconstruct user guide

This page and its subpages serve as a preliminary user guide for PyReconstruct, an extensible successor to RECONSTRUCT™ written from the ground up in Python. Please have a look at the source code on our lab's GitHub site. Question can be directed toward PyReconstruct's primary developers, Julian Falco (julian.falco@utexas.edu) and Michael Chirillo (m.chirillo@utexas.edu). You can navigate around this wiki by clicking the links below or in the sidebar to the left.


Installation / Launching

Install PyReconstruct and get it up and running.

Developer Version

Go all out and get the developer version of PyReconstruct.

Quickstart

Start a new series and begin tracing.

Main Window

Understand the layout and the various functions of the main window.

Alignments

Find out more about alignments and aligning.

Lists

Get access to lists and list operations.

Regular Expressions

Learn how to filter using regular expressions.

Series Operations

Perform operations with and to your series.

3D Scene

Visualize objects in three dimensions.

Curation

Make sure your work is in tip-top shape.

Metadata

Leave comments in the field, assign curators to objects, and more.

Miscellaneous

Explore a random collection of possibilities.