MultiQC

MultiQC aggregates results from different analyses across multiple samples into one interactive report. It currently supports 73 bioinformatics tools.

If you provide a path, multiqc will look for log files from the 73 tools it supports and produce reports using any that it finds.

Example MultiQC report can be found here:

!!RUN THE BELOW MULTIQC COMMAND ON AN IDEV SESSION OR SUBMIT!!

Running multiqc on TACC- DO THIS IN AN IDEV SESSION

module load tacc-apptainer
module load multiqc
#run multiqc at the parent directory level where all your analyses results are 
cds
cd my_rnaseq_course
multiqc -f .

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